topobench.data package

Subpackages

• topobench.data.datasets package
  • Submodules
  • topobench.data.datasets.citation_hypergaph_dataset module
    • CitationHypergraphDataset
      • CitationHypergraphDataset.FILE_FORMAT
      • CitationHypergraphDataset.RAW_FILE_NAMES
      • CitationHypergraphDataset.URLS
      • CitationHypergraphDataset.download()
      • CitationHypergraphDataset.process()
      • CitationHypergraphDataset.processed_dir
      • CitationHypergraphDataset.processed_file_names
      • CitationHypergraphDataset.raw_dir
      • CitationHypergraphDataset.raw_file_names
  • topobench.data.datasets.mantra_dataset module
    • MantraDataset
      • MantraDataset.FILE_FORMAT
      • MantraDataset.RAW_FILE_NAMES
      • MantraDataset.URLS
      • MantraDataset.download()
      • MantraDataset.process()
      • MantraDataset.processed_dir
      • MantraDataset.processed_file_names
      • MantraDataset.raw_dir
      • MantraDataset.raw_file_names
  • topobench.data.datasets.us_county_demos_dataset module
    • USCountyDemosDataset
      • USCountyDemosDataset.FILE_FORMAT
      • USCountyDemosDataset.RAW_FILE_NAMES
      • USCountyDemosDataset.URLS
      • USCountyDemosDataset.download()
      • USCountyDemosDataset.process()
      • USCountyDemosDataset.processed_dir
      • USCountyDemosDataset.processed_file_names
      • USCountyDemosDataset.raw_dir
      • USCountyDemosDataset.raw_file_names
  • Module contents
    • CitationHypergraphDataset
      • CitationHypergraphDataset.FILE_FORMAT
      • CitationHypergraphDataset.RAW_FILE_NAMES
      • CitationHypergraphDataset.URLS
      • CitationHypergraphDataset.download()
      • CitationHypergraphDataset.process()
      • CitationHypergraphDataset.processed_dir
      • CitationHypergraphDataset.processed_file_names
      • CitationHypergraphDataset.raw_dir
      • CitationHypergraphDataset.raw_file_names
    • MantraDataset
      • MantraDataset.FILE_FORMAT
      • MantraDataset.RAW_FILE_NAMES
      • MantraDataset.URLS
      • MantraDataset.download()
      • MantraDataset.process()
      • MantraDataset.processed_dir
      • MantraDataset.processed_file_names
      • MantraDataset.raw_dir
      • MantraDataset.raw_file_names
    • USCountyDemosDataset
      • USCountyDemosDataset.FILE_FORMAT
      • USCountyDemosDataset.RAW_FILE_NAMES
      • USCountyDemosDataset.URLS
      • USCountyDemosDataset.download()
      • USCountyDemosDataset.process()
      • USCountyDemosDataset.processed_dir
      • USCountyDemosDataset.processed_file_names
      • USCountyDemosDataset.raw_dir
      • USCountyDemosDataset.raw_file_names
• topobench.data.loaders package
  • Subpackages
    • topobench.data.loaders.graph package
      • Submodules
      • topobench.data.loaders.graph.hetero_datasets module
      • topobench.data.loaders.graph.mantra_dataset module
      • topobench.data.loaders.graph.manual_graph_dataset_loader module
      • topobench.data.loaders.graph.modecule_datasets module
      • topobench.data.loaders.graph.ogbg_datasets module
      • topobench.data.loaders.graph.planetoid_datasets module
      • topobench.data.loaders.graph.tu_datasets module
      • topobench.data.loaders.graph.us_county_demos_dataset_loader module
      • Module contents
    • topobench.data.loaders.hypergraph package
      • Submodules
      • topobench.data.loaders.hypergraph.citation_hypergraph_dataset_loader module
      • Module contents
    • topobench.data.loaders.pointcloud package
      • Submodules
      • topobench.data.loaders.pointcloud.geometric_shapes module
      • Module contents
    • topobench.data.loaders.simplicial package
      • Submodules
      • topobench.data.loaders.simplicial.mantra_dataset_loader module
      • Module contents
  • Submodules
  • topobench.data.loaders.base module
    • AbstractLoader
      • AbstractLoader.get_data_dir()
      • AbstractLoader.load()
      • AbstractLoader.load_dataset()
  • Module contents
    • AbstractLoader
      • AbstractLoader.get_data_dir()
      • AbstractLoader.load()
      • AbstractLoader.load_dataset()
    • CitationHypergraphDatasetLoader
      • CitationHypergraphDatasetLoader.load_dataset()
    • GeometricShapesDatasetLoader
      • GeometricShapesDatasetLoader.load_dataset()
    • HeterophilousGraphDatasetLoader
      • HeterophilousGraphDatasetLoader.load_dataset()
    • MantraSimplicialDatasetLoader
      • MantraSimplicialDatasetLoader.load_dataset()
    • ManualGraphDatasetLoader
      • ManualGraphDatasetLoader.get_data_dir()
      • ManualGraphDatasetLoader.load_dataset()
    • MoleculeDatasetLoader
      • MoleculeDatasetLoader.get_data_dir()
      • MoleculeDatasetLoader.load_dataset()
    • OGBGDatasetLoader
      • OGBGDatasetLoader.get_data_dir()
      • OGBGDatasetLoader.load_dataset()
    • PlanetoidDatasetLoader
      • PlanetoidDatasetLoader.load_dataset()
    • TUDatasetLoader
      • TUDatasetLoader.load_dataset()
    • USCountyDemosDatasetLoader
      • USCountyDemosDatasetLoader.load_dataset()
• topobench.data.preprocessor package
  • Submodules
  • topobench.data.preprocessor.preprocessor module
    • PreProcessor
      • PreProcessor.instantiate_pre_transform()
      • PreProcessor.load()
      • PreProcessor.load_dataset_splits()
      • PreProcessor.process()
      • PreProcessor.processed_dir
      • PreProcessor.processed_file_names
      • PreProcessor.save_transform_parameters()
      • PreProcessor.set_processed_data_dir()
  • Module contents
    • PreProcessor
      • PreProcessor.instantiate_pre_transform()
      • PreProcessor.load()
      • PreProcessor.load_dataset_splits()
      • PreProcessor.process()
      • PreProcessor.processed_dir
      • PreProcessor.processed_file_names
      • PreProcessor.save_transform_parameters()
      • PreProcessor.set_processed_data_dir()
• topobench.data.utils package
  • Submodules
  • topobench.data.utils.io_utils module
    • download_file_from_drive()
    • download_file_from_link()
    • get_file_id_from_url()
    • load_hypergraph_pickle_dataset()
    • read_ndim_manifolds()
    • read_us_county_demos()
  • topobench.data.utils.split_utils module
    • assign_train_val_test_mask_to_graphs()
    • k_fold_split()
    • load_coauthorship_hypergraph_splits()
    • load_inductive_splits()
    • load_transductive_splits()
    • random_splitting()
  • topobench.data.utils.utils module
    • data2simplicial()
    • ensure_serializable()
    • find_tetrahedrons()
    • find_triangles()
    • generate_zero_sparse_connectivity()
    • get_combinatorial_complex_connectivity()
    • get_complex_connectivity()
    • get_routes_from_neighborhoods()
    • load_cell_complex_dataset()
    • load_manual_graph()
    • load_manual_graph_second_structure()
    • load_manual_hypergraph()
    • load_manual_pointcloud()
    • load_manual_points()
    • load_manual_simplicial_complex()
    • load_simplicial_dataset()
    • make_hash()
    • select_neighborhoods_of_interest()
  • Module contents
    • data2simplicial()
    • download_file_from_drive()
    • ensure_serializable()
    • generate_zero_sparse_connectivity()
    • get_combinatorial_complex_connectivity()
    • get_complex_connectivity()
    • get_routes_from_neighborhoods()
    • load_cell_complex_dataset()
    • load_coauthorship_hypergraph_splits()
    • load_hypergraph_pickle_dataset()
    • load_inductive_splits()
    • load_manual_graph()
    • load_simplicial_dataset()
    • load_transductive_splits()
    • make_hash()
    • read_us_county_demos()
    • select_neighborhoods_of_interest()

Module contents

Init file for data module.